Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015800350.1_cds_XP_016469399.1_6153
CDS Infomation

[gene=LOC107791775] [db_xref=GeneID:107791775] [protein=reticuline oxidase-like] [protein_id=XP_016469399.1] [location=complement(33630..35309)] [gbkey=CDS]
Sequence

ATGTTTCCGCTCATAATTCTGATCAGCTTTTCACTTGCTTCCTTGTCTGAAACTGCTACT
GGAGCTGTTACAAATCTTTCAGCCTGCTTAATCAACCACAATGTCCATAACTTCTCTATT
TACCCCACAAGTAGAAATTACTTTAACTTGCTCCACTTCTCCCTTCAAAATCTTCGCTTT
GCTGCACCTTTCATGCCGAAACCAACCTTCATTATCCTACCAAGCAGTAAGGAGGAGCTC
GTGAGCACCATTTTTTGTTGCAGAAAAGCATCTTATGAAATCAGAGTAAGGTGCGGCGGA
CACAGTTACGAAGGAACTTCTTACGTTTCCTTTGACGCTTCTCCATTCGTGATCGTTGAC
TTGATGAAATTAGACGACGTTTCAGTAGATTTGGATTCTGAAACAGCTTGGGCTCAGGGC
GGCGCAACAATTGGCCAAATTTATTATGCCATTGCCAAGGTAAGTGACGTTCATGCATTT
TCAGCAGGTTCGGGACCAACAGTAGGATCTGGAGGTCATATTTCAGGTGGTGGATTTGGA
CTTTTATCTAGAAAATTCGGACTTGCTGCTGATAATGTCGTTGATGCTCTTCTTATTGAT
GCTGATGGACGGTTATTAGACCGAAAAGCCATGGGCGAAGACGTGTTTTGGGCAATCAGA
GGTGGCGGCGGTGGAAATTGGGGCATTGTTTATGCCTGGAAAATTCGATTACTCAAAGTG
CCTAAAATCGTAACAACTTGTATGATCTATAGGCCTGGATCCAAACAATACGTGGCTCAA
ATACTTGAGAAATGGCAAATAGTTACTCCAAATTTGGTCGATGATTTTACTCTAGGAGTA
CTGCTGAGACCTGCAGATCTACCCGCGGATATGAAATATGGTAATACTACTCCTATTGAA
ATATTTCCCCAATTCAATGCACTTTATTTGGGTCCAAAAACTGAAGTTCTTTCCATATCG
AATGAGACATTTCCGGAGCTAGGCGTTAAGAATGATGAGTGCAAGGAAATGACTTGGGTA
GAGTCAGCACTTTTCTTCTCCGAATTAGCTGACGTTAACGGGAACTCGACTGGTGATATC
TCCCGTCTGAAAGAACGTTACATGGACGGAAAAGGTTTTTTCAAAGGCAAAACGGACTAC
GTGAAGAAGCCAGTTTCAATGGATGGGATGCTAACATTTCTTGTGGAACTCGAGAAAAAC
CCGAAGGGATATCTTGTCTTTGATCCTTATGGCGGAGCCATGGACAAGATTAGTGATCAA
GCTATTGCTTTCCCTCATAGAAAAGGTAACCTTTTCGCGATTCAGTATCTAGCACAGTGG
AATGAAGAGGACGATTACATGAGCGACGTTTACATGGAGTGGATAAGAGGATTTTACAAT
ACAATGACGCCCTTTGTTTCAAGCTCGCCAAGGGGAGCTTATATCAACTACTTGGATATG
GATCTTGGAGTGAATATGGTCGACGACTACTTATTGCGAAATGCTAGTAGCAGTAGTCCT
TCTTCCTCTGTTGATGCTGTGGAGAGAGCTAGAGCGTGGGGTGAGATGTATTTCTTGCAT
AACTATGATAGGTTGGTTAAAGCTAAGACACAAATTGATCCACTAAATGTTTTTCGACAT
GAACAGAGTATTCCTCCTATGCTTGGTTCAACGCAAGAGCACAAGTATAGCAGTGAATGA

Peptide Sequence

PEP ID

XP_016469399.1
PEP Infomation

PREDICTED: reticuline oxidase-like [Nicotiana tabacum]
Sequence

MFPLIILISFSLASLSETATGAVTNLSACLINHNVHNFSIYPTSRNYFNLLHFSLQNLRF
AAPFMPKPTFIILPSSKEELVSTIFCCRKASYEIRVRCGGHSYEGTSYVSFDASPFVIVD
LMKLDDVSVDLDSETAWAQGGATIGQIYYAIAKVSDVHAFSAGSGPTVGSGGHISGGGFG
LLSRKFGLAADNVVDALLIDADGRLLDRKAMGEDVFWAIRGGGGGNWGIVYAWKIRLLKV
PKIVTTCMIYRPGSKQYVAQILEKWQIVTPNLVDDFTLGVLLRPADLPADMKYGNTTPIE
IFPQFNALYLGPKTEVLSISNETFPELGVKNDECKEMTWVESALFFSELADVNGNSTGDI
SRLKERYMDGKGFFKGKTDYVKKPVSMDGMLTFLVELEKNPKGYLVFDPYGGAMDKISDQ
AIAFPHRKGNLFAIQYLAQWNEEDDYMSDVYMEWIRGFYNTMTPFVSSSPRGAYINYLDM
DLGVNMVDDYLLRNASSSSPSSSVDAVERARAWGEMYFLHNYDRLVKAKTQIDPLNVFRH
EQSIPPMLGSTQEHKYSSE

Transcript Sequence

Gene sequence data has not been registered.